# STOCKHOLM 1.0 #=GF ID seq+RF00026_seed_1 #=GF AU Infernal 1.1.2 #=GF R2R SetDrawingParam prefixSsWithPkInDrawings false #=GF R2R SetDrawingParam prefixSsWithPkInDrawings false #=GF NUM_COV 1 #=GF WEIGHT_MAP u6 0.0199831 AB010698.1_46416-46518 0.484941 AARH01001853.1_272694-272592 0.363706 X60506.1_390-492 0.0506071 AC146705.11_15272-15374 0.0506071 AASG02002949.1_2307-2409 0.0506071 AACV01009611.1_38269-38167 0.0506071 AAAA02013555.1_2292-2394 0.0506071 CR855100.1_43897-43999 0.0506071 X52315.1_1-103 0.363706 X51447.1_262-364 0.303643 AAXJ01018701.1_864-762 0.741396 AAQA01000086.1_111608-111711 0.214106 L26849.1_150-253 0.214106 X51387.1_158-259 0.321159 AANU01133867.1_371-269 0.741396 X63066.1_363-465 0.303643 AAAB01008807.1_5121648-5121542 0.223885 AAWU01008690.1_11499-11605 0.164715 AAGE02013372.1_83708-83814 0.164715 AABU01002774.1_16804311-16804417 0.0186571 AAGH01007200.1_1053-947 0.0186571 AADE01001799.1_12821-12927 0.0186571 AAEU02000254.1_81013-80907 0.0186571 AAPQ01001284.1_654-760 0.0186571 AAPP01016905.1_3608-3714 0.0186571 AAQB01008633.1_461913-461807 0.0186571 AANI01001778.1_524-630 0.0186571 AAIZ01003051.1_11867-11761 0.0186571 AAPT01019380.1_23511-23405 0.0186571 AAPU01011102.1_63061-63167 0.0186571 AABS01000051.1_274751-274857 0.329431 AAHY01132583.1_7739-7845 0.179848 AAFC03115769.1_4330-4436 0.107665 AAPY01153714.1_3278-3172 0.107665 AALT01529386.1_701-595 0.0899241 AAYZ01436191.1_1883-1777 0.0899241 BAAB01141103.1_711-817 0.044777 AAZX01000860.1_13921-13815 0.044777 AACY022149992.1_529-635 0.044777 AATU01006594.1_28185-28081 1.02239 ABAV01046662.1_5606-5712 0.179848 AAFR03037834.1_2280-2178 0.465584 ABDC01230141.1_8073-7967 0.453425 AANN01390182.1_1050-1156 0.089924 M31687.1_705-811 0.089924 AACT01041609.1_35558-35664 0.329431 AANG01770494.1_575-681 0.449538 AAQQ01629113.1_2249-2143 0.21533 ABBA01062195.1_38876-38770 0.0199831 AAIY01587713.1_2016-2122 0.0199831 AAPN01022574.1_939-833 0.0199831 CR956385.13_177771-177665 0.0199831 U43841.1_336-439 0.647858 AANV02000039.1_44432-44535 0.647858 AAFB02000174.1_3561-3664 0.647858 CAAI01006173.1_984-1090 0.179848 BAAF04101838.1_670-565 1.12002 AAVX01043085.1_4211-4317 0.179848 AC148181.3_26639-26533 0.585376 CT573239.9_51807-51913 0.319731 AAYL01000007.1_235430-235323 0.617793 CAAE01010022.1_48689-48584 0.444085 AF529186.1_459-564 0.989097 AAXT01000001.1_1039074-1039179 0.849465 DQ666642.1_4-106 0.044777 AAWT01067003.1_344-451 0.850709 AANH01010141.1_91130-91025 0.666127 AB220565.1_723-829 0.449538 AAGK01000002.1_918046-917941 0.849465 AC136964.2_84202-84308 0.989097 X71486.1_1-101 1.35645 AACM02000382.1_262414-262518 2.23755 AC146661.3_155499-155393 1.50942 CAAL01001232.1_21304-21406 2.59589 AC087806.3_115795-115689 0.585376 L25920.1_3-109 0.449538 CU326409.1_117472-117365 0.719106 AC188110.1_71045-71151 1.12002 CR382132.1_1089192-1089093 1.95178 DQ068047.1_3306-3202 1.13937 AC189844.3_58074-58180 0.850709 AF095841.1_1-107 1.12002 AASM01002098.1_3099-2992 0.427679 X58843.1_3-106 2.03755 CAAJ01009065.1_446-339 0.855357 AAFU01001153.1_10970-11070 0.965404 AABL01000365.1_9537-9644 0.855357 AADS01000210.1_17114-17228 1.2331 AAPO01000024.1_134030-133927 0.816528 AAWC01002368.1_53508-53403 3.44856 CT990557.10_71286-71393 1.12002 AAFM01000021.1_681699-681594 0.816528 AAFT01000065.1_268653-268548 1.08177 AAEY01000056.1_129419-129306 0.707754 AACO02000104.1_123353-123240 0.707754 AE017348.1_872264-872377 0.707754 AAFP01000223.1_16410-16523 0.707754 CP000496.1_1065610-1065505 1.22971 AAID01000554.1_5500-5599 0.408038 X14196.1_133-285 1.7563 AAZN01000268.1_119544-119646 0.910165 AACW02000046.1_25302-25425 3.21072 CU104654.2_178130-178232 1.43133 EF419774.1_1-102 0.427679 AACI02000106.1_4087-4199 0.421215 CR382126.1_1858703-1858820 1.04984 AACH01000157.1_7933-7821 0.421215 AATM01000137.1_47790-47943 1.7563 Z73279.1_2843-2955 0.0702025 AACA01000433.1_2210-2322 0.0702025 AAEG01000112.1_87347-87459 0.0702025 AABY01000279.1_8828-8716 0.0702025 AACG02000194.1_7974-8086 0.0702025 AACF01000007.1_86925-87036 0.933241 AADM01000279.1_397-288 1.04984 AF083031.2_127905-127809 3.76098 AC144401.2_82868-82974 2.14685 AANW02001116.1_942-1048 4.25656 AY953942.1_4-110 2.28013 AJ416571.1_12089-11984 3.68664 AATT01000229.1_70559-70673 3.69093 AL590448.1_66612-66503 3.82388 AY136823.1_430-532 3.84698 AF305715.1_117-214 0.272619 X82228.1_412-509 0.272619 AAFI02000006.1_10321-10427 2.28013 AF053588.1_116-223 4.19387 AAJI01001561.1_684-795 1.46023 AACQ01000098.1_66592-66693 1.1736 AAFO01000026.1_267271-267372 1.1736 AAIM02000091.1_125555-125392 1.50365 X78552.1_318-415 0.545237 X79014.1_475-572 1.25824 X78551.1_329-426 0.817856 AC149301.1_92055-91961 3.08975 AAEE01000007.1_553473-553580 1.56296 AAEL01000070.1_7754-7647 1.56296 X82229.1_194-291 1.25824 AAHK01000939.1_1885-1993 3.10314 CP000581.1_336841-336949 2.04914 AC152105.2_17973-17865 2.04914 AC092562.4_129660-129562 2.69526 AAXI01000109.1_30199-30115 0.204019 DQ103593.1_29389-29298 4.74134 AP004520.1_55775-55881 4.37955 AAHC01000890.1_7726-7624 4.91151 AAHF01000007.1_1651650-1651551 0.652861 U58510.1_7462-7568 2.63862 ABAR01000008.1_592107-592006 0.408038 AP007171.1_1600650-1600749 1.68215 AARE01000569.1_1814-1714 0.408038 AASO01000114.1_1873-1980 0.705411 AAIW01000495.1_17855-17954 0.705411 X04788.1_1-98 0.313797 AAGI01000262.1_1755-1855 0.204019 AY102720.1_4016-3910 3.90111 X57046.1_441-540 1.05153 AC148038.3_33473-33580 4.55795 AAZY02000001.1_305276-305169 3.12591 CR380959.2_1159577-1159689 0.933241 CAAC02000605.1_61448-61549 0.321159 M10329.1_1-108 0.0199831 CR382136.2_1319844-1319739 1.22971 X12565.1_540-652 0.0702025 AASC02049566.1_23588-23693 1.28521 AC121317.7_68985-69092 0.0199831 AAPN01095965.1_240-347 0.0199831 AAFD02000024.1_69022-69131 2.23755 AABX02000022.1_362974-363076 0.965404 ABPA01000003.1_180549-180442 0.617793 AACE03000008.2_905684-905797 0.905066 FR796420.1_621391-621294 0.545237 AAFN02000036.1_11182-11077 2.3472 AAGV020896327.1_1288-1181 0.179848 AATU01006589.1_7799-7695 1.02239 AFQF01002057.1_12805-12639 1.50365 CAAA01180605.1_4-106 0.0199831 ABDF02000090.1_1201765-1201660 5.16014 AACU03000132.1_2986497-2986398 1.03743 AAIL02000075.1_131155-131066 1.25763 X76546.1_281-387 0.719106 CAAB02029384.1_647-542 0.444085 AAEX03005034.1_14917-14815 0.218421 AC242743.1_25579-25465 1.2331 BAAB01206473.1_1073-967 0.044777 M24606.1_401-507 0.0186571 AL844509.2_1632740-1632633 0.427679 AC188639.6_7118-7225 1.6816 #=GF USED_GSC TRUE #=GF DID_FRAGMENTARY FALSE. globalOuterFirst,Last=0,108 #=GF R2R keep allpairs u6 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR u6 PP ********99998*************************************************************************.********************* AB010698.1_46416-46518 GUCCC---UUCG--GGGACAUCUGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAUAAAUCGAGAAAUGGUCCAAAUUUUU #=GR AB010698.1_46416-46518 PP *****...****..***********************************************************************99********************* AARH01001853.1_272694-272592 GUCUC---UUCG--GAGACAUCUGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR AARH01001853.1_272694-272592 PP *****...****..***********************************************************************99********************* X60506.1_390-492 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR X60506.1_390-492 PP *****...****..***********************************************************************99********************* AC146705.11_15272-15374 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR AC146705.11_15272-15374 PP *****...****..***********************************************************************99********************* AASG02002949.1_2307-2409 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR AASG02002949.1_2307-2409 PP *****...****..***********************************************************************99********************* AACV01009611.1_38269-38167 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR AACV01009611.1_38269-38167 PP *****...****..***********************************************************************99********************* AAAA02013555.1_2292-2394 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR AAAA02013555.1_2292-2394 PP *****...****..***********************************************************************99********************* CR855100.1_43897-43999 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR CR855100.1_43897-43999 PP *****...****..***********************************************************************99********************* X52315.1_1-103 GUCUC---UUCG--GAGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR X52315.1_1-103 PP *****...****..***********************************************************************99********************* X51447.1_262-364 GUCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAAUUUU #=GR X51447.1_262-364 PP *****...****..***********************************************************************99********************* AAXJ01018701.1_864-762 ACCCC---UUCG--GGGGUAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAGUGUAAAAAGUUUUU #=GR AAXJ01018701.1_864-762 PP *****...****..***********************************************************************99********************* AAQA01000086.1_111608-111711 GUUCAU--UCCG-AUGAACAUAUACUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAAAUUUUU #=GR AAQA01000086.1_111608-111711 PP *****9..9999.*************************************************************************.********************* L26849.1_150-253 GUUCAU--UCCG-AUGAACAUAUACUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAAAUUUUU #=GR L26849.1_150-253 PP *****9..9999.*************************************************************************.********************* X51387.1_158-259 GUUCU---UCCG--AGAACAUAUACUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAAAUUUUU #=GR X51387.1_158-259 PP *****...9999..************************************************************************.********************* AANU01133867.1_371-269 ACCCC---CUCG--GGGGUAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAGUGUAAAAAGUUUUU #=GR AANU01133867.1_371-269 PP *****...9***..***********************************************************************99********************* X63066.1_363-465 GCCCC---UUCG--GGGACAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUUU #=GR X63066.1_363-465 PP *****...****..***********************************************************************99********************* AAAB01008807.1_5121648-5121542 GUCCUUGCUUCGGCAGGACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAAB01008807.1_5121648-5121542 PP ********99998*************************************************************************.********************* AAWU01008690.1_11499-11605 GUCUUUGCUUCGGCAAGACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAWU01008690.1_11499-11605 PP ********99998*************************************************************************.********************* AAGE02013372.1_83708-83814 GUCUUUGCUUCGGCAAGACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAGE02013372.1_83708-83814 PP ********99998*************************************************************************.********************* AABU01002774.1_16804311-16804417 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AABU01002774.1_16804311-16804417 PP ********99998*************************************************************************.********************* AAGH01007200.1_1053-947 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAGH01007200.1_1053-947 PP ********99998*************************************************************************.********************* AADE01001799.1_12821-12927 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AADE01001799.1_12821-12927 PP ********99998*************************************************************************.********************* AAEU02000254.1_81013-80907 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAEU02000254.1_81013-80907 PP ********99998*************************************************************************.********************* AAPQ01001284.1_654-760 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAPQ01001284.1_654-760 PP ********99998*************************************************************************.********************* AAPP01016905.1_3608-3714 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAPP01016905.1_3608-3714 PP ********99998*************************************************************************.********************* AAQB01008633.1_461913-461807 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAQB01008633.1_461913-461807 PP ********99998*************************************************************************.********************* AANI01001778.1_524-630 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AANI01001778.1_524-630 PP ********99998*************************************************************************.********************* AAIZ01003051.1_11867-11761 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAIZ01003051.1_11867-11761 PP ********99998*************************************************************************.********************* AAPT01019380.1_23511-23405 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAPT01019380.1_23511-23405 PP ********99998*************************************************************************.********************* AAPU01011102.1_63061-63167 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAPU01011102.1_63061-63167 PP ********99998*************************************************************************.********************* AABS01000051.1_274751-274857 GUACUAGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCAUAUUUUU #=GR AABS01000051.1_274751-274857 PP ********99998*************************************************************************.********************* AAHY01132583.1_7739-7845 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCAUAUUUUU #=GR AAHY01132583.1_7739-7845 PP ********99998*************************************************************************.********************* AAFC03115769.1_4330-4436 GUGCUCGUUUGG-CAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGUGUUCCAUAUUUUU #=GR AAFC03115769.1_4330-4436 PP *******66666.*************************************************************************.********************* AAPY01153714.1_3278-3172 GUGCUCGUUUGG-CAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGUGUUCCAUAUUUUU #=GR AAPY01153714.1_3278-3172 PP *******66666.*************************************************************************.********************* AALT01529386.1_701-595 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGUGUUCCAUAUUUUU #=GR AALT01529386.1_701-595 PP ********99998*************************************************************************.********************* AAYZ01436191.1_1883-1777 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGUGUUCCAUAUUUUU #=GR AAYZ01436191.1_1883-1777 PP ********99998*************************************************************************.********************* BAAB01141103.1_711-817 GUACUUGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR BAAB01141103.1_711-817 PP ********99998*************************************************************************.********************* AAZX01000860.1_13921-13815 GUACUUGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AAZX01000860.1_13921-13815 PP ********99998*************************************************************************.********************* AACY022149992.1_529-635 GUACUUGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR AACY022149992.1_529-635 PP ********99998*************************************************************************.********************* AATU01006594.1_28185-28081 GACCAC--UUCG-GUGGUCAUCCGUAAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAUAAAUCGAGAAGUAUCGCACUUUUUG #=GR AATU01006594.1_28185-28081 PP ******..****.************************************************************************99********************* ABAV01046662.1_5606-5712 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAAAUUUUU #=GR ABAV01046662.1_5606-5712 PP ********99998*************************************************************************.********************* AAFR03037834.1_2280-2178 GUGCU---UCAG-CAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACAUGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AAFR03037834.1_2280-2178 PP *****...9***.*************************************************************************.********************* ABDC01230141.1_8073-7967 GUGCUUGUUUGG-CAGCACAUAUACUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-UGUGAAGUGUUCCAUAUUUUU #=GR ABDC01230141.1_8073-7967 PP *******66666.*************************************************************************.********************* AANN01390182.1_1050-1156 GUGCUUGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AANN01390182.1_1050-1156 PP ********99998*************************************************************************.********************* M31687.1_705-811 GUGCUUGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR M31687.1_705-811 PP ********99998*************************************************************************.********************* AACT01041609.1_35558-35664 GUACUUGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCUUAUUUUU #=GR AACT01041609.1_35558-35664 PP ********99998*************************************************************************.********************* AANG01770494.1_575-681 GUGCUCACUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACGCAAAUU-UGUGAAGUGUUCCAUAUUUUU #=GR AANG01770494.1_575-681 PP ********99998*************************************************************************.********************* AAQQ01629113.1_2249-2143 GUGCUCGUUUGG-CAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AAQQ01629113.1_2249-2143 PP *******66666.*************************************************************************.********************* ABBA01062195.1_38876-38770 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR ABBA01062195.1_38876-38770 PP ********99998*************************************************************************.********************* AAIY01587713.1_2016-2122 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AAIY01587713.1_2016-2122 PP ********99998*************************************************************************.********************* AAPN01022574.1_939-833 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AAPN01022574.1_939-833 PP ********99998*************************************************************************.********************* CR956385.13_177771-177665 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR CR956385.13_177771-177665 PP ********99998*************************************************************************.********************* U43841.1_336-439 AUCCAC--UUCG-GUGGAAAUCCCAUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCUCAUA-CGAGAAGUUAAAAAGUUUUUU #=GR U43841.1_336-439 PP ******..****.*************************************************************************.********************* AANV02000039.1_44432-44535 AUCCAC--UUCG-GUGGAAAUCCCAUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCUCAUA-CGAGAAGUUAAAAAGUUUUUU #=GR AANV02000039.1_44432-44535 PP ******..****.*************************************************************************.********************* AAFB02000174.1_3561-3664 AUCCAC--UUCG-GUGGAAAUCCCAUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCUCAUA-CGAGAAGUUAAAAAGUUUUUU #=GR AAFB02000174.1_3561-3664 PP ******..****.*************************************************************************.********************* CAAI01006173.1_984-1090 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACCCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR CAAI01006173.1_984-1090 PP ********99998*************************************************************************.********************* BAAF04101838.1_670-565 GCACUAG-UUCUCUAGUGCAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCUCAUUUUU #=GR BAAF04101838.1_670-565 PP *******.888889************************************************************************.********************* AAVX01043085.1_4211-4317 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUG #=GR AAVX01043085.1_4211-4317 PP ********99998*************************************************************************.********************* AC148181.3_26639-26533 GUGCUCGCUUCGGCAGCACAUAUACUAAAACUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACAUGCAAAUU-CGUGAAGUGUUUCAUAUUUUU #=GR AC148181.3_26639-26533 PP ********99998*************************************************************************.********************* CT573239.9_51807-51913 GUGCUUGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUCUUUUA #=GR CT573239.9_51807-51913 PP ********99998*************************************************************************.********************* AAYL01000007.1_235430-235323 GGCCUCC-UUCGGGAGGCCAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAGUGUAACCAAUUUUU #=GR AAYL01000007.1_235430-235323 PP *****99.99998777*********************************************************************99********************* CAAE01010022.1_48689-48584 GUGUUAC-UUCGGUAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCUUCAUUUUU #=GR CAAE01010022.1_48689-48584 PP *******.999989************************************************************************.********************* AF529186.1_459-564 GUAUCUC-CUCGGAGGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCAUAUUUUC #=GR AF529186.1_459-564 PP *****99.777769************************************************************************.********************* AAXT01000001.1_1039074-1039179 GGCCUC--UUCG-GAGGCCAUCAGAAAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCUCAAAUCGAGAAGUGUAAAAACGAUUU #=GR AAXT01000001.1_1039074-1039179 PP *****9..9999.788********************************************************************999************999999999 DQ666642.1_4-106 ----UUGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR DQ666642.1_4-106 PP ....6667999989879*********************************************************************.********************* AAWT01067003.1_344-451 GUGUGUUCUUCGGCUUCACAUAUAUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCAUAUUUUU #=GR AAWT01067003.1_344-451 PP *****99*99997888**********************************************************************.********************* AANH01010141.1_91130-91025 GUGUUAU-UUCGAUAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCUCAUUUUC #=GR AANH01010141.1_91130-91025 PP *******.****99************************************************************************.********************* AB220565.1_723-829 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGAAAAUU-UGUGAAGCGUUCCAUAUUUAA #=GR AB220565.1_723-829 PP ********99998*************************************************************************.********************* AAGK01000002.1_918046-917941 GGCCUC--UUCG-GAGGCCAUCAGAAAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCUCAAAUCGAGAAGUGUAAAACCCAUUU #=GR AAGK01000002.1_918046-917941 PP *****9..9999.888********************************************************************999*********999999999999 AC136964.2_84202-84308 GUGCUCGUUUGG-CAGCACCUAUAUUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGUGCAAGGAUGACACACAAAUU-UGCGAAGCGUUCCAUAUUUUU #=GR AC136964.2_84202-84308 PP *******66666.*************************************************************************.********************* X71486.1_1-101 GUGC----UUCG---GCACAACUGUUAAAAUUGGAAAAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAUAAAUCGAGAAAUGGUUCCAAAUUUU #=GR X71486.1_1-101 PP ***9....8888...9*********************************************************************99********7777777767777 AACM02000382.1_262414-262518 UGUCUC--UUCG-GAGACAAUAUGGUCAAACAGUAAAAAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACAUUCAAAUCUAGAGAAGCUCAAAUUUUUU #=GR AACM02000382.1_262414-262518 PP ******..****.**********************************************************************9999********************* AC146661.3_155499-155393 GUGCUCGUUUGG-CAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGAAAAAAAAAAAUCA #=GR AC146661.3_155499-155393 PP *******66666.*************************************************************************.********9999999999999 CAAL01001232.1_21304-21406 GACCC---UUCG--GGGUCAUCCGUCAAAUUUGGAACGUAACAGAGAAGAUUAGCAUGGCCCCUGCGUAAGGAUGACACGCAUUAAGCGAGAUGGUAGCUCAUUUUUU #=GR CAAL01001232.1_21304-21406 PP *****...****..**************************************************************************************99999999 AC087806.3_115795-115689 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUAAAA #=GR AC087806.3_115795-115689 PP ********99998*************************************************************************.********************* L25920.1_3-109 GUACUCGCUUCGGCGGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAUUCGUGAAGCGUUCCAUAUUUU- #=GR L25920.1_3-109 PP ********999989*********************************************************************************************. CU326409.1_117472-117365 GUGCUCACUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGUGCAAGAAUGACACGCAAAUU-CUUGAAGAGUUCCAUAUUUUU #=GR CU326409.1_117472-117365 PP ********99998*************************************************************************.********************* AC188110.1_71045-71151 GUGCUUGUUUGG-CAGCACAUGUAUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCUCCUGUGCAAGGAUGACACGCAAAUU-CCUGAAGCCUUCCACAUUUUU #=GR AC188110.1_71045-71151 PP *******66666.*************************************************************************.********************* CR382132.1_1089192-1089093 GUCC----UUCG---GGACAUAUGGUCAAUUUGAAAAAAUACAGAGAAGAUUAGCAUGGCCCCUGCAUAAGGAUGACACGCUUUAC-AAAGAGAUUUAAACCGUUUUU #=GR CR382132.1_1089192-1089093 PP ***9....8888...9**********************************************************************.********************* DQ068047.1_3306-3202 GUCCN---UUCG--GGGACAUCCGAUAAANNUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGNAUGACACGCAAAAU-CGAGAAAUGGUCCAAUUUUUU #=GR DQ068047.1_3306-3202 PP *****...****..****************************************************************97455556.********************* AC189844.3_58074-58180 AUGCUCACUUCGGCAGCACAUAUAUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGCUGACACGCAAAUU-UAUGAAGCGUUCCAUAUUUAA #=GR AC189844.3_58074-58180 PP ********99998*************************************************************************.********************* AF095841.1_1-107 GUGCUCGUUUGG-CAGCACUUACACUAAAAUUGGAAUGAUACAGAGAAGAUUAGCACGGUCCCUGGGCAAGGAUGACACACAAGUU-CGUGAAGCGUUCCAUAUUUUU #=GR AF095841.1_1-107 PP *******66666.*************************************************************************.********************* AASM01002098.1_3099-2992 GGCUCUC-UUCGGAGAGCCGUUUGUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACAUGACGUUCGAGAAGGAAUGUAAUUUUUU #=GR AASM01002098.1_3099-2992 PP ***9999.99997666*******************************************************************9999********************* X58843.1_3-106 -AACC-----CGAAGGGUCAUCCGUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCGAGGAUGACACGCUCAAAGCGAGAAGGAUUCCCCAUUUUU #=GR X58843.1_3-106 PP .5555.....33354444**************************************************88************************************** CAAJ01009065.1_446-339 GGCUCUC-UACGGAGAGCCGUUUGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACAUGACGUUCGAGAAGGAAUGUAAAUUUUU #=GR CAAJ01009065.1_446-339 PP ***9999.99997666*******************************************************************9999********************* AAFU01001153.1_10970-11070 GCCC----UUCG---GGGCAUUUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUACUC-AAAGAGACGCUACCAAUUUUU #=GR AAFU01001153.1_10970-11070 PP ***9....8888...9***************************************************988****************.********************* AABL01000365.1_9537-9644 GGCUCUC-UACGGAGAGCCGUUUGCUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACAUGACGUUCGAGAAGGAAUGUAAAUUUUU #=GR AABL01000365.1_9537-9644 PP ***9999.99997666*******************************************************************9999********************* AADS01000210.1_17114-17228 GUCCCC--UUCGGGGUGACAUACGAAAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACGCUUUCCCGGAGUGGU-GUCUCAAUAUUU #=GR AADS01000210.1_17114-17228 PP *****9..88883666********************************************************************99889999999.555555555555 AAPO01000024.1_134030-133927 ACUAUC--UUCG-GAUAGUACAUUUGUCAAUUUUAACAAUACAGAGAAGAUUAGCAUUGUCCUUGCAUAAAGAUGACACGCUUUAC-AAAGAGAUUUACAGUUUUUUU #=GR AAPO01000024.1_134030-133927 PP ******..****.*************************************************************************.********************* AAWC01002368.1_53508-53403 --GCCCACUUCGGUGGUGCAUACGUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACAUGUAGUCAGAAUGGAUUCACCUAUGGGU #=GR AAWC01002368.1_53508-53403 PP ..999999999989999*********************************************************************8888888889999999999999 CT990557.10_71286-71393 GUGCCCUUUUGG-UAGCACAUAUACUAAAAUUGGAACGAUACAGUGAAGAUUAGCAUGGCCCCUGCGCAAGGAUAACACGCAAAUU-CGUGAUGCAUUCCAUAUUCUU #=GR CT990557.10_71286-71393 PP *****9955666.9************************************************************************.********************* AAFM01000021.1_681699-681594 ACUAUCG-UUCGCGAUAGUACAUUUGUCAAUUUUAACAAUACAGAGAAGAUUAGCAUUGUCCUUGCAUAAAGAUGACACGCUUUAC-AAAGAGAUUUACCAUUUUUUU #=GR AAFM01000021.1_681699-681594 PP *******.****99************************************************************************.********************* AAFT01000065.1_268653-268548 ACUAUUG-UUCGCAAUAGUACAUCUGUCAAUUUUAACAAUACAGAGAAGAUUAGCAUUGUCCUUGCAUAAAGAUGACACGCUAUAC-AAAGAGAUUUACCAUUUUUUU #=GR AAFT01000065.1_268653-268548 PP *******.****99************************************************************************.********************* AAEY01000056.1_129419-129306 GCCACC--UUCG-GGUGGCAUAAGA-AAAAUUGGAACAAUACAGAGAAGAUUAGCAUUGCCCCUGCAUAAGGAUGACAAACUCGAGCAGAGAGGAGAACCAAAUAUUU #=GR AAEY01000056.1_129419-129306 PP *****9..9999.899*****9988.99********************************************************999********9999999999999 AACO02000104.1_123353-123240 GCCACC--UUCG-GGUGGCAUAAGA-AAAAUUGGAACAAUACAGAGAAGAUUAGCAUUGCCCCUGCAUAAGGAUGACAAACUCGAGCAGAGAGGAGAACCAAAUAUUU #=GR AACO02000104.1_123353-123240 PP *****9..9999.899*****9988.99********************************************************999********9999999999999 AE017348.1_872264-872377 GCCACC--UUCG-GGUGGCAUAAGA-AAAAUUGGAACAAUACAGAGAAGAUUAGCAUUGCCCCUGCAUAAGGAUGACAAACUCGAGCAGAGAGGAGAACCAAAUAUUU #=GR AE017348.1_872264-872377 PP *****9..9999.899*****9988.99********************************************************999********9999999999999 AAFP01000223.1_16410-16523 GCCACC--UUCG-GGUGGCAUAAGA-AAAAUUGGAACAAUACAGAGAAGAUUAGCAUUGCCCCUGCAUAAGGAUGACAAACUCGAGCAGAGAGGAGAACCAAAUAUUU #=GR AAFP01000223.1_16410-16523 PP *****9..9999.899*****9988.99********************************************************999********9999999999999 CP000496.1_1065610-1065505 ACUAUCC-UUCGGGAUGGUACACUUGUCAAUUUUAACAAUACAGAGAAGAUUAGCAUUGUCCUUGCAUAAAGAUGACACGCUUUAC-AAAGAGAUUUAACAUUUUUUU #=GR CP000496.1_1065610-1065505 PP *******.99999*************************************************************************.********************* AAID01000554.1_5500-5599 ---------ACAAUUUCAAUAGUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUACCAAUUUUU #=GR AAID01000554.1_5500-5599 PP .........3332445666667788999***************************************988************************************** X14196.1_133-285 UGAUC---UUCG--GAUCACUUUGGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACAUUGAGAGAAAACCCAUUUUUUU #=GR X14196.1_133-285 PP *****...****..****************************************************************987766666********************* AAZN01000268.1_119544-119646 GUACCC--UCCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAAUAAGUUUUU #=GR AAZN01000268.1_119544-119646 PP ***997..8888..566*********************************************************************.********************* AACW02000046.1_25302-25425 GACACG--------CUGUCACUUAUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUAAAUCUCUGAGAAGGGCAACAUUUUUUU #=GR AACW02000046.1_25302-25425 PP ***854........58********************************************************************9999****999************* CU104654.2_178130-178232 GUACUCGUUUGG-CAGCACAUAUAUUAAAAUAGGAACGAUACAGAGAAGAUCAGCAUGGUCCCUGCACAA----GACAUGCAAAUU-CAUGAAGCAUUCUAUAUUUUU #=GR CU104654.2_178130-178232 PP *******66666.********************************************************9....69**********.********************* EF419774.1_1-102 -GCUCUC-UUCGGAGAGCCGUUUGUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACAUGACGUUCGAGAAGGAAUGUAAU----- #=GR EF419774.1_1-102 PP .998888.9999756699*****************************************************************9999*******999999998..... AACI02000106.1_4087-4199 GUCCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR AACI02000106.1_4087-4199 PP ******999999..************************************************************************.********************* CR382126.1_1858703-1858820 GUCCAUA-U-----UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAAGAUUUUUUU #=GR CR382126.1_1858703-1858820 PP *****87.4.....************************************************************************.********************* AACH01000157.1_7933-7821 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAAUUCGUUUUU #=GR AACH01000157.1_7933-7821 PP ******998898..************************************************************************.********************* AATM01000137.1_47790-47943 CGAUC---UUCG--GAUCACUUUGGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACAUUGAGAGAAACCCAAUUUUUUU #=GR AATM01000137.1_47790-47943 PP *****...****..****************************************************************977766666********************* Z73279.1_2843-2955 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR Z73279.1_2843-2955 PP ******998898..************************************************************************.********************* AACA01000433.1_2210-2322 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR AACA01000433.1_2210-2322 PP ******998898..************************************************************************.********************* AAEG01000112.1_87347-87459 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR AAEG01000112.1_87347-87459 PP ******998898..************************************************************************.********************* AABY01000279.1_8828-8716 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR AABY01000279.1_8828-8716 PP ******998898..************************************************************************.********************* AACG02000194.1_7974-8086 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR AACG02000194.1_7974-8086 PP ******998898..************************************************************************.********************* AACF01000007.1_86925-87036 GUCCCGACCUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUCGUUUUUU #=GR AACF01000007.1_86925-87036 PP ***976655555..79**********************************************************************.********************* AADM01000279.1_397-288 GCUCAUUGUGGGCGUGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUACAAGUUUUUU #=GR AADM01000279.1_397-288 PP *****974333355************************************************************************.********************* AF083031.2_127905-127809 GAUCU---UUUG-GAUAUUCCAUCAUAAAUUUAAUACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGUAAGGAUGACAUGAAAAUCACUGGUAGUAUUUU-------- #=GR AF083031.2_127905-127809 PP *****...9999.9**********************************************************************9944444555555544........ AC144401.2_82868-82974 GUGCUUGUUUGG-CAACACAUAUACUAAAAUUUGAAACAUACAGAAAAGAUUGGCAUAGCCCCUCUGCAAGGAUGUCGUGCAAAUU-CCUGAAGCAUUCCAUAUUUUA #=GR AC144401.2_82868-82974 PP *******66666.*************************************************************************.********************* AANW02001116.1_942-1048 UAGUCUGAAUCG--GACUACUAAUCUAAAAUUGGAACAAUACAGAGAAGAUUAGCAAAACCCCUGCGCAAGGCCGGU-UACUUCUA-CGAGAAGUUAAGGAAUUUUUU #=GR AANW02001116.1_942-1048 PP *******99999..*************************************************************86.56778888.********************* AY953942.1_4-110 -CCUCCGAACCG-GCAGGCAUCCAA-AUUAUGGAAACGAUACAGAGAAGAUUAGCAUGGUCCCUGCGUAAGGAUGACCGUAAAGCA-AUCAAGAAGAAAAACAUUUUU #=GR AY953942.1_4-110 PP .99998888888.889999999988.778899*********************************************999988887.555555555555666666666 AJ416571.1_12089-11984 --AGGCCUCACG-GCUUUAAAAUGCGUCACUUGGAACGAUACAGAGAAGAUUAGCAUAGCCCCUACGCAAGGAAGACACGCACAAAUCGAGAAAUAGCCCAAAGCGGA #=GR AJ416571.1_12089-11984 PP ..5555577777.88868999****************************************************************99********8888888888888 AATT01000229.1_70559-70673 -GGAUUC-UUCG-GGACCUCAUCAAAAUAAUUGGAUACAAACAGAGAAGAUUAGCAUGGCCCCUGUGCAAGGAUGACACGCAAAACUUGAGUGGAUGGGCAAGUUUUU #=GR AATT01000229.1_70559-70673 PP .888888.****.877778888888899*******************************99************************99999999998888888888888 AL590448.1_66612-66503 -GUAGUU-UUCU-ACCGCCAU-----UGAUUUGGAACAACACAGAGAAGAUUAGCAUGGCCCCUGCGUAAGGACGACAUGUAUAACUUGAGAGGUGAUCCGGCUUUU- #=GR AL590448.1_66612-66503 PP .444433.4444.33333333.....44899****************************************************************555555555555. AY136823.1_430-532 -UGGACA-UAUG-CUCGACAUU--GCUAAAUUGGAACGAUACAGAGACGAU-AGCAUGUCCCCUGCGCAAGGAUGACGUUACAAAU-CGAGAUAUGUUUUAGGCUUUU #=GR AY136823.1_430-532 PP .555555.7777.666656654..55889*********************7.**********************************.999999998888888889999 AF305715.1_117-214 GCCCC---UUCG-GGGGACAUCCAC-AAACUGGAAAUUCAACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR AF305715.1_117-214 PP *****...****.9******99998.889999999999999*********************************************.**************999.... X82228.1_412-509 GCCCC---UUCG-GGGGACAUCCAC-AAACUGGAAAUUCAACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR X82228.1_412-509 PP *****...****.9******99998.889999999999999*********************************************.**************999.... AAFI02000006.1_10321-10427 -CCUCCGAACCG-GCAGGCAUCCAA-AUUAUGGAAACGAUACAGAGAAGAUUACCAUGGUCCCUGCGUAAGGAUGACCGUAAAGCA-AUCAAGAAGAAAAACAUUUUU #=GR AAFI02000006.1_10321-10427 PP .99998888888.889999999988.778899*********************************************999988887.555555555555666666666 AF053588.1_116-223 -UGCAG--UUUG-CUGCGCUAU----UAGUUUGGAACAACACUGAGAAGAUUAGCAUGGCCCCUGCGCAAGGACGGCAUCUUUCUU-UGAGAGGUUCGCCCAGCUUUU #=GR AF053588.1_116-223 PP .66665..8888.666556554....55789*******************************************************.********7777777777777 AAJI01001561.1_684-795 GCUCAUAAUACC-CAGAGCAUUUGGUC-AAUUGAAACGAUACGGAGAAGAUUUGCAUGGCCUCUGCUCUAGGAUGACACGCUCAAUCAAAGACAAGCUACAAGUUUUU #=GR AAJI01001561.1_684-795 PP ****99977777.8***********77.789*******888**************************988************************************** AACQ01000098.1_66592-66693 ---UA--UUGCGCGUUCGGAACUUGUCAACUUU-AAAAUUACAGAGAAAAUUAGCAUUUCCCCUGCAUAAGGACGGAACGCUUUAC-AAAGAGAUUUACCAUUUUUUU #=GR AACQ01000098.1_66592-66693 PP ...33..47777655467777777777777665.556679**********************************************.********************* AAFO01000026.1_267271-267372 ---UA--UUGCGCGUUCGGAACUUGUCAACUUU-AAAAUUACAGAGAAAAUUAGCAUUUCCCCUGCAUAAGGACGGAACGCUUUAC-AAAGAGAUUUACCAUUUUUUU #=GR AAFO01000026.1_267271-267372 PP ...33..47777655467777777777777665.556679**********************************************.********************* AAIM02000091.1_125555-125392 GCCAGCGAACCG--CUGGCCUAUGGUCCAACUGAAAAUAUACAGAGAAGAUGAGCAUGGCCCCUGCACUAGGAUGACACAUGUAAUCAAAGAGACGCAAACCAUUUUU #=GR AAIM02000091.1_125555-125392 PP *******55555..*************************************9***************988****************9********************* X78552.1_318-415 GCCCC---UUCG-GGGGACAUCCAC-AAUCUGGAAAUUCAACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR X78552.1_318-415 PP *****...****.9******99997.667777777888888*********************************************.**************999.... X79014.1_475-572 GCCCC---UUCG-GGGGACAUCCA--CAACCUGGAACUUCACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR X79014.1_475-572 PP *****...****.9*****99988..689999****99877*********************************************.**************999.... X78551.1_329-426 GCCCC---UUCG-GGGGACAUCCAC-CACCUGGAAAUUCAAUAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR X78551.1_329-426 PP *****...****.9*******9998.667888888888999*********************************************.**************999.... AC149301.1_92055-91961 GUUCC---UUCA--GGGACAUCCAAUAAAAUUGG--------AGAGAAGAUAUGCACAGCCCAUGUGCAAGGAUGACAUGCACAAACCGAGAGUUGGUGUGCACAUAC #=GR AC149301.1_92055-91961 PP *****...***9..********************........6****************************************************7777777777777 AAEE01000007.1_553473-553580 GGUUCUCUUGCG-GGAACCCGAUUCUAAAAUUGGCUUUAAACAGAGAAGAUUAGCAA-ACCCCUGCGUAAGGCUGGUUUCAUUCGC-CGAAAGGUAUAACCAAUUUUU #=GR AAEE01000007.1_553473-553580 PP ******999999.*********************9999777***************7.99**************************.********************* AAEL01000070.1_7754-7647 GGUUCUCUUGCG-GGAACCCGAUUCUAAAAUUGGCUUUAAACAGAGAAGAUUAGCAA-ACCCCUGCGUAAGGCUGGUUUCAUUCGC-CGAAAGGUAUAACCAAUUUUU #=GR AAEL01000070.1_7754-7647 PP ******999999.*********************9999777***************7.99**************************.********************* X82229.1_194-291 GCCCC---UUCG-GGGGACAUCCA--CAACCUGGAACUUCACAGACAAGAUUAGCAUUCUCCCUGCGCAAGGCCGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR X82229.1_194-291 PP *****...****.9*****99988..689999****99877*********************************************.**************999.... AAHK01000939.1_1885-1993 CCUUCGUCAAAG-CGAAGGACAUCCACAAUCUGGAAAUUCACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUGGCUUUUCUGU #=GR AAHK01000939.1_1885-1993 PP *****9976777.9******************999888766*********************************************.********************* CP000581.1_336841-336949 GUCUUAUCUUCGAUAUGACACCUGAUAAACUGGAAAAAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGUGAGUGUUCGC-UCGGACGCGCAC--------- #=GR CP000581.1_336841-336949 PP *****99999998899***************9988776999*********************************************.999999993333......... AC152105.2_17973-17865 GUCUUAUCUUCGAUAUGACACCUGAUAAACUGGAAAAAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGUGAGUGUUCGC-UCGGACGCGCAC--------- #=GR AC152105.2_17973-17865 PP *****99999998899***************9988776999*********************************************.999999993333......... AC092562.4_129660-129562 UCGCU---UGCG-CAGCGCAUACACUGAAACUCGAACGAUACAG---GGAUUAGCA-GGCCUCUGUACAAGGAUGGCACGCCACUU-UGUGAAAUGUUCCAUAUAGAA #=GR AC092562.4_129660-129562 PP *****...****.*******************************...578******.79***************************.********************* AAXI01000109.1_30199-30115 --------------------------------------------AGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUACCAUUUUUU #=GR AAXI01000109.1_30199-30115 PP ............................................79*********************988************************************** DQ103593.1_29389-29298 -GUUU---UAAA-GAAAUCUUAUUCUGUACUUG----------GAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGCUAUUCAAGCU-AAUUUGUAUUUACUAAAUUAA #=GR DQ103593.1_29389-29298 PP .7777...6666.78887999999999999999..........79*****************************************.776666666666666666666 AP004520.1_55775-55881 GUACA---AUCA-GUUUAUCUAAAAUAAAUUUGGAACUAUACUGAGAAGAUUAGCAUGGCACCUGCAUA--UAUGACACACACUUU-AAAAAAAAUUGGGUUAUUUAU #=GR AP004520.1_55775-55881 PP *****...8888.8****************999*****988***************************9..8**************.999999999999999999999 AAHC01000890.1_7726-7624 GUUGCUAGUUCU-GGCUACUUUCA------UUUCAACGAUACAGAGAAAUUUAGCAUGGUCCUUGGACAAAGAUGACCCUAAUAUCCCUUUGAGUGCACAAAAUGUUU #=GR AAHC01000890.1_7726-7624 PP *******99999.9*****99965......58899*************************************************998888889999999999999999 AAHF01000007.1_1651650-1651551 GCC-----UUCG----GGCAUUUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACGCUCAAUCAAAGAGAAGCUACCAGUUUUU #=GR AAHF01000007.1_1651650-1651551 PP ***.....9999....9******************************************************************************************* U58510.1_7462-7568 --UUUU-CUGCG-UUCACGCAUCUUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAUAAUCCGAGAUUAGGUUCCUUUAUUU #=GR U58510.1_7462-7568 PP ..3333.77777.5444566677778*********************************************************************9999999999999 ABAR01000008.1_592107-592006 AUGCC---UUCG--GGCAU--UUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUACCAGUUUUU #=GR ABAR01000008.1_592107-592006 PP *****...****..***99..567889****************************************988************************************** AP007171.1_1600650-1600749 GCC-----CUCG-A--GGCAUCCGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGUUGACACGCUUUAUCAAGGAGAUGCUAAACUUUUUU #=GR AP007171.1_1600650-1600749 PP ***.....8888.8..**********************************************************************99999***************** AARE01000569.1_1814-1714 GUGCC---UUCG--GGCAUUUGGUC---AAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUACCAGUUUUU #=GR AARE01000569.1_1814-1714 PP *****...****..**999887766...99*************************************988************************************** AASO01000114.1_1873-1980 GCCUUUCUGCCU-UCGGGCAUUUGGUCUUAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUCCAAGUUUUU #=GR AASO01000114.1_1873-1980 PP ***998743444.788***************************************************988************************************** AAIW01000495.1_17855-17954 GCC-----UUCG----GGCAUUUGGUCUUAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUCCAAGUUUUU #=GR AAIW01000495.1_17855-17954 PP ***.....9999....9**************************************************988************************************** X04788.1_1-98 ----C---UUCG--GGGACAUCCGAUAAAAUUGGAACGACACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAAUGGUCCAAAUUUU- #=GR X04788.1_1-98 PP ....4...9***..59*********************************************************************99********************. AAGI01000262.1_1755-1855 --GCC---UCCG--GGCAC--CAGUCAAUUUUGAAAAAAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUACCAUUUUUU #=GR AAGI01000262.1_1755-1855 PP ..444...6666..43344..44444556666665555999**************************988************************************** AY102720.1_4016-3910 AUAAUCU-AAAA-UAUCAUUCAAAUCAAACCUGGAACGAUUGAGAGAAGAUUAGCAUGGCCUCUGCACAAGGAUGACACGCAUAAAUCGAGAAAUGUUCCAAAUAAAG #=GR AY102720.1_4016-3910 PP *****98.6666.8*****999999999987799***************************************************99********************* X57046.1_441-540 -GCCC---UUCG--GGGACAUCCAC-AAACUGGAAAUUCAACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUUCGGU #=GR X57046.1_441-540 PP .6666...9**9..88659999998.888999999999999*********************************************.******************999 AC148038.3_33473-33580 UUUACCAGACAGCCGGAAGAGGGAGAGGGUUAGGAAAGACUCAAGGAAGAUUAGCAUGGCCCCUGCGCAAGAAAGACACAGAAAUU-CGCGAAGCACUCCAUGCUCUU #=GR AC148038.3_33473-33580 PP 99988886555567888888888888889999999999877*********************************************.********************* AAZY02000001.1_305276-305169 -CUCACC-UUCGGGUGAGUAAAUUCUAAAAUUGGCUUUAAACAGAGAAGAUUAGCAA-ACCCCUGCGUAAGGCUGGUUUCAUGAGC-CGAUAGGUAUAACCAAUUUUU #=GR AAZY02000001.1_305276-305169 PP .666666.999986666657778889********9999777***************7.99**************************.********************* CR380959.2_1159577-1159689 GUCCUUGCUUCU--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUCGUUUUUU #=GR CR380959.2_1159577-1159689 PP ****98865555..9***********************************************************************.********************* CAAC02000605.1_61448-61549 GUUCU---UCCG--AGAACAUAUACUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUACCAAAUUUUU #=GR CAAC02000605.1_61448-61549 PP *****...9999..************************************************************************.********************* M10329.1_1-108 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR M10329.1_1-108 PP ********99998*************************************85**********************************.********************* CR382136.2_1319844-1319739 ACUAUCC-UUCUGGAUAGUACAUUUGUCAAUUUUAACAAUACAGAGAAGAUUAGCAUUGUCCUUGCAUAAAGAUGACACGCUUUAC-AAAGAGAUUUAACCAUUUUUU #=GR CR382136.2_1319844-1319739 PP *******.555559************************************************************************.********************* X12565.1_540-652 GUUCGCGCUUCG--UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUAUUUCGUUUUU #=GR X12565.1_540-652 PP ******998898..************************************************************************.********************* AASC02049566.1_23588-23693 GUACUGUUCACG-CAGUACAUAUACUAAAAUUGGAAAGAUACAGAGAAGACUAGCAUGGCCCCUGCAUAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AASC02049566.1_23588-23693 PP *****9887888.*************************************************************************.********************* AC121317.7_68985-69092 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AC121317.7_68985-69092 PP ********99998***********98765699******************************************************.********************* AAPN01095965.1_240-347 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AAPN01095965.1_240-347 PP ********999999************************************************************************.********************* AAFD02000024.1_69022-69131 GUCCCCGGUUCGGGGUGACAUUAAACAAACGCUUAAAUAUACAGAGAAGAUUAGCAUGGUCCCUGUGCAAGGAUGACACGCAUAAUCGAAGAGAAGCAAACCUUUUUU #=GR AAFD02000024.1_69022-69131 PP *****99977773566**********************************************************************9899999999999999999999 AABX02000022.1_362974-363076 CGCCC---UUCG--GGGCAAUUUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUACUC-AAAGAGACGCUACCAAUUUUU #=GR AABX02000022.1_362974-363076 PP *****...****..*****************************************************988****************.********************* ABPA01000003.1_180549-180442 GGCCUCC-UUCGGGAGGCCAUCCGAUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCACAAAUCGAGAAGUGUAACCAAUUUUU #=GR ABPA01000003.1_180549-180442 PP *****99.99998777*********************************************************************99********************* AACE03000008.2_905684-905797 GUCCAAGUUUC---UGGACAUUUGGUCAAUUUGAAACAAUACAGAGAUGAUCAGCAGUUCCCCUGCAUAAGGAUGAACCGUUUUAC-AAAGAGAUUUACUUCAUUUUU #=GR AACE03000008.2_905684-905797 PP *****986444...9***********************************************************************.********************* FR796420.1_621391-621294 GCCCC---UUCG-GGGGACAUCCAC-AACCUGGAAAUUCAACAGAGAAGAUUAGCACUCUCCCUGCGCAAGGCUGAUGUCAAUCUU-CGAGAGAUAUAGCUUUU---- #=GR FR796420.1_621391-621294 PP *****...****.9******99997.667777777788888*********************************************.**************999.... AAFN02000036.1_11182-11077 GUGAAAGCGCCG-GUUCGGAACUUGUCAAAUUUAAA-AUUACAGAGAAAAUUAGCAUUUCCCCUGCAUAAGGACGGAACGCUUUAC-AAAGAGAUUUACAACAUUUUU #=GR AAFN02000036.1_11182-11077 PP ******988889.9*************999997666.569**********************************************.********************* AAGV020896327.1_1288-1181 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-UGUGAAGCGUUCCAUAUUUUU #=GR AAGV020896327.1_1288-1181 PP ********99998***********98765699******************************************************.********************* AATU01006589.1_7799-7695 AACCAC--UUCG-GUGGUCAUCCGUAAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAUAAAUCGAGAAGUAUCGCACUUUUUG #=GR AATU01006589.1_7799-7695 PP ******..****.************************************************************************99********************* AFQF01002057.1_12805-12639 GCCAGCGAACC--GCUGGCCUAUGGUCACAUUGAAACGAUACAGAGAAGAUGAGCAUGGCCCCUGCACUAGGAUGACACAUGUAAUCAAAGAGACGCAACCCAUUUUU #=GR AFQF01002057.1_12805-12639 PP *******5555..5*************************************9***************988************************************** CAAA01180605.1_4-106 ----UCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR CAAA01180605.1_4-106 PP ....888999998989**********************************************************************.********************* ABDF02000090.1_1201765-1201660 -GAAGAG-GUCGCUGUUCGAAUCGCUGACGUUGCAAC-AGACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGUAAGUUGAACU-CCUGAACCAUACUCUGGUCAA #=GR ABDF02000090.1_1201765-1201660 PP .888888.88883344777888888888888887776.689**************************988****************.****************99999 AACU03000132.1_2986497-2986398 GCC-----UUCG----GGCAUUUGGUCAAUUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCAAUCAAAGAGAAGCUCAACAUUUUU #=GR AACU03000132.1_2986497-2986398 PP ***.....9999....9**************************************************988************************************** AAIL02000075.1_131155-131066 ------G-UUCG-AAUCGCUAACAGG-----------UCAACAGAGAAGAUUAGCAUGGCCCCUGCACUAGGAUGACACGCUCACUCAAAGAGAAGCUAAACAUUUUU #=GR AAIL02000075.1_131155-131066 PP ......2.4444.3233332222221...........23469*************************988************************************** X76546.1_281-387 GUGUUAGCUUCGGCAACACAUCUAUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCAUAUUUUU #=GR X76546.1_281-387 PP ********99998*************************************************************************.********************* CAAB02029384.1_647-542 GUGUUAC-UUCGGUAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCUUCAUUUUC #=GR CAAB02029384.1_647-542 PP *******.999989************************************************************************.********************* AAEX03005034.1_14917-14815 GUGCU---UCGG-CAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUU-CGUGAAGCGUUCCAUAUUUUU #=GR AAEX03005034.1_14917-14815 PP *****...8899.*************************************************************************.********************* AC242743.1_25579-25465 GUCCCC--UUCGGGGUGACAUACGAAAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACGCUUUCCCGGAGUGGU-GUCUCAAUAUUU #=GR AC242743.1_25579-25465 PP *****9..88883666********************************************************************99889999999.555555555555 BAAB01206473.1_1073-967 GUACUUGCUUCGGCAGUACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR BAAB01206473.1_1073-967 PP ********99998*************************************************************************.********************* M24606.1_401-507 GUUCUUGCUUCGGCAGAACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAAU-CGUGAAGCGUUCCACAUUUUU #=GR M24606.1_401-507 PP ********99998*************************************************************************.********************* AL844509.2_1632740-1632633 GGCUCUC-UUCGGAGAGCCGUUUGUUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACAUGACGUUCGAGAAGGAAUGUAAUUUUUU #=GR AL844509.2_1632740-1632633 PP ***9999.99997666*******************************************************************9999********************* AC188639.6_7118-7225 GUGCUUGUUCUG-CAGCAUAAACACUAAAAUUGGAAUGAUAAAGAGAAGAUUAGGAUGGCCCCUGUGCAAGGAUGACACACAA-UU-UGUGAAACGUUCCAUAUUUUU #=GR AC188639.6_7118-7225 PP ******964444.566777888899******************************************************9986.56.89******************* #=GC SS_cons <<<<<.........>>>>>.............................<<<<<<<<<<<<<<........>>..>>>>>>>>>>>>...................... #=GC RF guccccg.UUCG.ggggacAUauaaUaAAaUUGgAACgAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACgcaaaau.cgaGAaauguuccauaUUUUU #=GC cons nnnnnnn-YYCG-nnnnnYnYnYnnnnAAnUUGRAAYRAYACAGAGAAGAUUAGCAURGCCCCUGCRYAAGGAUGACAYnnnnnnY-nRnGARRnnYnnnnnnUYUnY #=GC conss 421224403333032111313132232332333333333322212212211221113333122123113122331333211111130131332211311122233323 #=GC col_entropy_0 122122211111122111111111211101000100110100000000000000000100000000100000000011111111111111001111111111111111 #=GC col_entropy_1 ............................................................................................................ #=GC col_entropy_2 700800073520210898424779267196577565287355513214210620009196224026085144670911266566756553764476767679723123 #=GC col_entropy_3 257729960265344905741953216845858627827010072507875459707681151025221590275916690176480502520014031625804391 #=GC cov_SS_cons .22.2.........2.22.......................................................................................... #=GF R2R keep p //